| Agency-wide | Protocol | Communication Protocol Between DEQ and BCEH Regarding Risks to Human Health From Environmental Contaminants |
| Agency-wide | Policy | Generative Artificial Intelligence Policy PS25-12 |
| Agency-wide | Policy | Creative Assets Policy PS24-01 |
| Agency-wide | Policy | Developing Guidance Documents Policy PS25-06 |
| Agency-wide | Manual | Enforcement Procedures Manual |
| Agency-wide | Policy | Logo Clothing and Field and Safety Gear Policy PS22-03 |
| Agency-wide | Agreement | Memorandum of Agreement Between DEQ and BCEH Regarding Risks to Human Health From Environmental Contaminants (also see DEQ-BCEH protocol) |
| Agency-wide | Memorandum | Memorandum of Understanding Between DEQ and Idaho Dairymen's Association, Inc. |
| Agency-wide | Memorandum | Memorandum of Understanding Between DEQ and Idaho’s Public Health Districts |
| Agency-wide | Memorandum | Memorandum of Understanding Between the Idaho Department of Environmental Quality and the British Columbia Ministry of Water, Land, and Air Protection |
| Agency-wide | Policy | Mobile Devices Policy PS22-01 |
| Agency-wide | Policy | Peer Review Policy PS25-09 |
| Agency-wide | Policy | Policy Statement Development and Maintenance PS25-05 |
| Agency-wide | Policy | Policy Statement for Social Media PS23-02 |
| Agency-wide | Policy | Public Records Requests Policy PS23-06 |
| Agency-wide | Policy | Quality Management Policy PS21-03 |
| Agency-wide | Policy | Records Management Policy PS23-07 |
| Agency-wide | Policy | Safety Policy PS23-01 |
| Agency-wide | Policy | Succession and Delegation of Authority Policy PS21-04 |
| Air Quality | Guidance | A Guide to Visible Emissions Evaluations |
| Air Quality | Policy | Air Quality Administrative Penalties Policy PS25-04 |
| Air Quality | Guidance | Air Quality in Idaho: Supplemental Fugitive Dust Control Information |
| Air Quality | Guidance | Crop Residue Burning Operating Guide |
| Air Quality | Guidance | Dust, Fugitive: Prevention and Control Plan |
| Air Quality | Guidance | Emissions Data Hierarchy Guidance |
| Air Quality | Guidance | Guidance for the Remediation of Petroleum-Contaminated Media |
| Air Quality | Guidance | Guideline for Performing Air Quality Impact Analyses |
| Air Quality | Guidance | Interpreting the Word “Addressed” in Subsection 210.20. |
| Air Quality | Guidance | Modeling Guidance |
| Air Quality | Policy | Policy on Reviewing a Request for Institution with Sensitive Population Status for the Crop Residue Burning Program PM10-03 |
| Air Quality | Manual | Procedures Manual for Air Pollution Control |
| Air Quality | Manual | Source Test Guidance Manual |
| Drinking Water | Guidance | After the Flood: Protecting Your Drinking Water |
| Drinking Water | Guidance | Choosing an Environmental Consultant |
| Drinking Water | Memorandum | Clarification of Interim Compliance Requirements for the Drinking Water Lead and Copper Rule Revisions |
| Drinking Water | Guidance | Demonstrating Technical, Financial, and Managerial Capacity in New Public Water Systems |
| Drinking Water | Policy | Determining Interest Rate on Loans from the Water Pollution Control and Drinking Water Loan Accounts Policy PS24-02 |
| Drinking Water | Fact Sheet | Drinking Water Cross-Connection Control Programs |
| Drinking Water | Guidance | Drinking Water Monitoring Waiver Guidance |
| Drinking Water | Policy | Drinking Water Penalty Policy PS22-02 |
| Drinking Water | Guidance | Drinking Water Separation and Setback Design Guidance |
| Drinking Water | Guidance | Drinking water, submersible pumps, and mercury seals: A potential problem |
| Drinking Water | Guidance | Grant and Loans Customer Handbook |
| Drinking Water | Guidance | Guidance for Actions to be Taken Following Drinking Water System Depressurization |
| Drinking Water | Guidance | Guidance for Determining Equalization Water Storage for Public Water Systems |
| Drinking Water | Guidance | Guidance for Handling Waste Residuals Resulting from Drinking Water Treatment |
| Drinking Water | Guidance | Guidance for New Source Water Testing Procedures for Public Drinking Water Systems |
| Drinking Water | Guidance | Guidance for Public Water System Disposal of Water from Construction, Maintenance, and Operations |
| Drinking Water | Guidance | Guidance to Determine Continual Operational Problems Necessitating Submittal of an Operation and Maintenance Manual |
| Drinking Water | Guidance | How to Hire an Engineer for Public Water System and Wastewater System Design or Modification |
| Drinking Water | Guidance | Idaho’s Initial Monitoring Requirements for New Public Drinking Water Sources |
| Drinking Water | Guidance | Implementation Guidance for the Drinking Water Program – Ground Water Rule |
| Drinking Water | Guidance | Implementation Guidance for the Filter Backwash Recycling Rule |
| Drinking Water | Guidance | Implementation Guidance for the Interim Enhanced Surface Water Treatment Rule |
| Drinking Water | Guidance | Implementation Guidance for the Long-Term 2 Enhanced Surface Water Treatment Rule |
| Drinking Water | Guidance | Implementation Guidance for the Long-Term One Enhanced Surface Water Treatment Rule |
| Drinking Water | Guidance | Implementation Guidance for the Stage 1 Disinfectants and Disinfection By-Products Rule |
| Drinking Water | Guidance | Implementation Guidance for the Stage 2 Disinfectants and Disinfection By-Products Rule |
| Drinking Water | Memorandum | Memorandum of Understanding Between DEQ and Bureau of Labs |
| Drinking Water | Memorandum | Memorandum: Implementation of IDAPA 58.01.08.552.01.b.v Waiving Requirement to Keep Static Pressure in Distribution System Below 80 psi |
| Drinking Water | Guidance | Point of Use Guidance |
| Drinking Water | Guidance | Procedure for Determining Ground Water Under the Direct Influence of Surface Water (GWUDI) |
| Drinking Water | Guidance | Protecting Drinking Water Sources in Idaho |
| Drinking Water | Guidance | Recommendations for Hiring a Contract Operator: For Idaho Public Drinking Water and Public Wastewater Systems |
| Drinking Water | Fact Sheet | Revised Total Coliform Rule: Level 1 & Level 2 Assessments and Corrective Actions |
| Drinking Water | Fact Sheet | Revised Total Coliform Rule: Repeat Monitoring Requirements for Small Systems |
| Drinking Water | Fact Sheet | Revised Total Coliform Rule: Requirements for Seasonal Systems |
| Drinking Water | Fact Sheet | Revised Total Coliform Rule: Requirements for Small Systems on Monthly Monitoring |
| Drinking Water | Fact Sheet | Revised Total Coliform Rule: Requirements for Small Systems on Quarterly Monitoring |
| Drinking Water | Guidance | Revised Total Coliform Rule: Sample Instructions |
| Drinking Water | Guidance | Revised Total Coliform Rule: Seasonal Start-Up Procedures |
| Drinking Water | Guidance | Slow Sand Filter Guidance for Authorizing Service after Scraping, Resanding, or Reopening |
| Drinking Water | Guidance | Surface Water Treatment Rule Compliance Guidance |
| Drinking Water / Wastewater | Guidance | Guidance for Hiring a Contract Operator - Drinking Water/Wastewater |
| Drinking Water / Wastewater | Memorandum | Memorandum of Understanding between Department of Environmental Quality and Division of Occupational and Professional Licenses |
| Grants and Loans | Agreement | Operational agreement - Management of the Clean Water State Revolving Fund Program (March 2018) |
| Grants and Loans | Agreement | Operational agreement – Drinking Water State Revolving Fund Loan Program (March 2018) |
| Ground Water | Guidance | Guidance for Developing a Ground Water Quality Monitoring Program for Managed Recharge Projects by Land Application |
| Ground Water | Agreement | Idaho Ground Water Protection Interagency Cooperative Agreement between Idaho DEQ, Idaho Department of Water Resources, Idaho State Department of Agriculture, Idaho Soil and Water Conservation Commission, Idaho Public Health Districts, and Idaho Department of Health and Welfare |
| Ground Water | Policy | Policy for Addressing Degraded Ground Water Quality Areas |
| Ground Water | Guidance | Statistical Guidance for Determining Background Ground Water Quality and Degradation |
| Hazardous Waste | Manual | Hazardous Waste Enforcement Procedures Manual |
| IPDES | Letter | EPA Letter of Idaho Pollutant Discharge Elimination System Program Authorization and CROMERR Approval, E. Scott Pruitt, June 5, 2018 |
| IPDES | Letter | EPA Letter to DEQ Finding Idaho Pollutant Discharge Elimination System Program Application Submission Complete, Dennis J. McLerran, September 3, 2016 |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Application Program Description 2016 |
| IPDES | Letter | Idaho Pollutant Discharge Elimination System Application, 2017 Cover Letter |
| IPDES | Letter | Idaho Pollutant Discharge Elimination System Application, Attorney General’s Signed Certification |
| IPDES | Letter | Idaho Pollutant Discharge Elimination System Application, Governor’s Letter |
| IPDES | Agreement | Idaho Pollutant Discharge Elimination System Application, Memorandum of Agreement (MOA) with EPA |
| IPDES | Letter | Idaho Pollutant Discharge Elimination System Application, Program Description |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Compliance Monitoring Strategy |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Compliance Monitoring Strategy |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Designation Criteria and Selection Process for Small MS4s |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Effluent Limit Development Guidance |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Enforcement Response Guide |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Industrial User Survey Guidance |
| IPDES | Memorandum | Idaho Pollutant Discharge Elimination System MOU with Idaho State Department of Agriculture (ISDA) |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Public Participation in the Permitting Process |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Technical Support Document Reasonable Potential Analysis Workbook |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System Tribal Participation Process |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System User’s Guide to Permitting and Compliance Volume 2—Publicly Owned Treatment Works |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System User’s Guide to Permitting and Compliance Volume 3—Non-POTW |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System User’s Guide to Permitting and Compliance Volume 4—General Permits Excluding Storm Water |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System User’s Guide to Permitting and Compliance Volume 5—Storm Water |
| IPDES | Guidance | Idaho Pollutant Discharge Elimination System User’s Guide to Permitting and Compliance Volume 6—Sewage Sludge (Biosolids) |
| IPDES | Guidance | daho Pollutant Discharge Elimination System Effluent Limit Development Guidance (Supplemental) |
| IPDES | Memorandum | Idaho Pollutant Discharge Elimination System Application, Memorandum of Agreement (MOA) with Idaho Transportation Department |
| IPDES | Guidance | IPDES User’s Guide to Permitting and Compliance Volume 1—General Information |
| IPDES | Memorandum | Memorandum of Understanding between DEQ and the City of Boise |
| IPDES | Memorandum | Memorandum of Understanding for DEQ IPDES and US EPA – Development and Maintenance of the NPDES Electronic Reporting Tool NeT for ID Aquaculture |
| Recycled Water / Reuse | Guidance | Guidance for Reclamation and Reuse of Municipal and Industrial Wastewater |
| Recycled Water / Reuse | Guidance | Reuse Permit Writer’s Manual |
| Solid Waste | Memorandum | Between the Idaho State Department of Agriculture and IDEQ regarding regulations of composting facilities |
| Solid Waste | Guidance | Guidance for Siting, Design, and Operation of Nonhazardous Solid Waste Impoundments in Idaho |
| Solid Waste | Guidance | Guidance for Siting, Design, and Operations of Non-Municipal Solid Waste Landfills in Idaho |
| Storm Water | Guidance | Idaho Catalog of Storm Water Best Management Practices |
| Surface Water | Policy | 401 Certification – ACOE 60 Day Deadline Policy Directive |
| Surface Water | Memorandum | Application of Water Quality Standards to Non-Perennial Waters |
| Surface Water | Guidance | Concepts and Recommendations for Using the “Natural Conditions” Provisions of the Idaho Water Quality Standards |
| Surface Water | Memorandum | Continuous Temperature Monitoring Requirements in NPDES Permits |
| Surface Water | Policy | Assessing Salmonid Spawning in Idaho Waterbodies |
| Surface Water | Guidance | DEQ Procedures for Decontamination of Monitoring Equipment |
| Surface Water | Guidance | Guidance for Interpreting Antidegradation Policy for Unassessed, Ephemeral, and Intermittent Streams |
| Surface Water | Guidance | Guidance for the Use of Wood Preservatives |
| Surface Water | Guidance | Guide to Selection of Sediment Targets for Use in Idaho TMDLs |
| Surface Water | Guidance | Idaho Antidegradation Implementation Procedures |
| Surface Water | Guidance | Idaho Mixing Zone Implementation Guidance |
| Surface Water | Guidance | Idaho Waste Management Guidelines for Aquaculture Operations |
| Surface Water | Guidance | Implementation Guidance for the Idaho Copper Criteria for Aquatic Life: Using the Biotic Ligand Model (BLM) |
| Surface Water | Guidance | Implementation Guidance for the Idaho Mercury Water Quality Criteria |
| Surface Water | Guidance | Implementation Guidance for the Idaho Selenium Criteria for Aquatic Life |
| Surface Water | Guidance | Implementation of The 2016 Idaho Mixing Zone Guidance |
| Surface Water | Memorandum | Memorandum of Understanding (MOU) Implementing the Nonpoint Source Water Quality Program in Idaho |
| Surface Water | Memorandum | Memorandum of Agreement between Idaho Department of Environmental Quality and Idaho Department of Lands for Shared Stewardship Collaboration |
| Surface Water | Guidance | Section 401 Water Quality Certification Guidance |
| Surface Water | Guidance | State of Idaho Guidance for Development of Total Maximum Daily Loads |
| Surface Water | Memorandum | Synching TMDLs with the Integrated Report |
| Surface Water | Guidance | Use Attainability Analysis Guidance |
| Surface Water | Guidance | Water Body Assessment Guidance 3rd Edition |
| Surface Water | Policy | Water Quality Administrative Penalty Guidance |
| Surface Water | Protocol | Water Quality Monitoring Protocols for Placement and Retrieval of Temperature Data Loggers in Idaho Streams |
| Surface Water | Guidance | Water Quality Trading Guidance |
| Wastewater | Guidance | Biosolids Beneficial Use and Disposal Flowchart |
| Wastewater | Memorandum | Delegation of Authority for Issuing Waivers for the sections of the Idaho Rules for Public Drinking Water Systems, Wastewater Rules, and Recycled Water Rules |
| Wastewater | Memorandum | Determination of Reasonably Accessible Sewer |
| Wastewater | Guidance | EPA Biosolids Guidance |
| Wastewater | Guidance | Guidance for Evaluating Wastewater Lagoon Seepage Rates |
| Wastewater | Guidance | Guidance for Land Application of Municipal Biosolids |
| Wastewater | Guidance | Level 1 Nutrient-Pathogen Evaluation Mass-Balance Spreadsheet |
| Wastewater | Memorandum | Separation Distances from Subsurface Sewage Disposal Systems to an In-Ground Pool (2013) |
| Wastewater | Guidance | Nutrient-Pathogen Evaluation Program for On-Site Wastewater Treatment Systems |
| Wastewater | Guidance | Pile Sampling White Paper |
| Wastewater | Memorandum | Regulation of Byproducts and Wastewater from Beef Cattle Animal Feeding Operations |
| Wastewater | Memorandum | Regulation of Byproducts and Wastewater from Cultured Dairy Production |
| Wastewater | Memorandum | Relative to Oil and Gas Conservation, Water Quality, Waste Facility Plans, and Air Quality |
| Wastewater | Guidance | Rule Interpretation for Land Application of Bagged Biosolids that Meet Class A Exceptional Quality Requirements |
| Wastewater | Guidance | Seepage Test Spreadsheet for Electronic Method |
| Wastewater | Guidance | Seepage Test Spreadsheet for Manual Method or Hook Gauge |
| Wastewater | Memorandum | Septic Tank Manholes |
| Wastewater | Guidance | Technical Guidance Manual |
| Wastewater | Memorandum | Use of Wastewater Holding Tanks |
| Wastewater | Guidance | Visual Sample Plan (VSP) software |
| Wastewater | Guidance | Wastewater Lagoon Seepage Test Statistical Review |
| Wastewater | Manual | Wastewater Land Application Operators Study and Reference Manual |
| Wastewater | Memorandum | County, State, and Federal Department/Agency Exemption from Installer’s Registration Permit |
| Wastewater | Guidance | Guidance for the Land Application of Domestic Septage WW |
| Wastewater | Memorandum | Large Soil Absorption System Ground Water Constituent Monitoring (2016) |
| Wastewater | Memorandum | Authority to Revoke a Subsurface Sewage Permit (1995) |
| Wastewater | Memorandum | Failing Subsurface Sewage Disposal System |
| Wastewater | Memorandum | Guidance on Recording Waypoints from Subsurface Sewage Disposal Drainfields (2018) |
| Wastewater | Memorandum | Individual Subsurface Sewage Disposal Site Evaluations in Wetlands (1998) |
| Wastewater | Memorandum | Large Soil Absorption Systems |
| Wastewater | Memorandum | Permit Requirements for Increased Flows at Single Family Dwellings |
| Wastewater | Memorandum | Permitting Requirements for Federal and State Agencies |
| Wastewater | Memorandum | Recommended Language for all SSD Permits (2021) |
| Wastewater | Memorandum | Revocation of a Subsurface Sewage Disposal Installer or Septic Tank Pumper Permit (2014) |
| Wastewater | Memorandum | DEQ RV Park On-Site Wastewater Disposal Systems |
| Wastewater | Memorandum | Septic Tank Pumper Permit Verbiage and Permit Application/Renewal Dates |
| Wastewater | Memorandum | Septic Tanks and Dosing Chamber Uses (2014) |
| Wastewater | Memorandum | Split Flows (IDAPA 58.01.03.007.15) (2014) |
| Wastewater | Memorandum | Subsurface Sewage Disposal Permit Application Supplement for Non-Domestic Wastewater Use, Review, and Approval (2016) |
| Wastewater | Memorandum | Use of Multi-Compartment Septic Tanks as Individual Residence Septic Tank Effluent Pump Stations (2015) |
| Wastewater | Memorandum | Use of Multiple Septic Tanks in Series |
| Wastewater | Memorandum | Variance to IDAPA 58.01.03 Process and Inclusion of the Technical Guidance Committee (2014) |
| Wastewater | Memorandum | Engineering Design Review for Subsurface Sewage Disposal Systems (2015) |
| Wastewater | Memorandum | Subsurface Sewage Disposal Permits that Span Multiple Properties (Easements) |
| Water Quality | Agreement | Agreement for funding and management for Coeur d'Alene Lake Management Plan |
| Water Quality | Policy | Dispute Resolution Advisory Panel for Plan and Specification Engineering Disputes Policy PS20-08 |
| Water Quality | Guidance | Implementation Guidance for Idaho’s Human Health Water Quality Arsenic Criteria |
| Water Quality | Agreement | Interagency agreement between DEQ and the Idaho Division of Building Safety – Plumbing Bureau |
| Water Quality | Memorandum | Clean Water Act Section 401 Water Quality Certification Scope Directive |
| Water Quality | Memorandum | Memorandum of Understanding Between DEQ and The Idaho Rural Water Association (IRWA) |
| Water Quality | Memorandum | 2025 Memorandum of Understanding Water Quality Division Environmental Performance Partnership Agreement (WQ PPA) |
| WM&R | Policy | Bunker Hill Land Transfer Policy PS25-01 |
| WM&R | Policy | Bunker Hill Mining and Metallurgical Complex Waste Acceptance Criteria |
| WM&R | Policy | Bunker Hill Superfund Site Analysis of Remedial Actions and Recommended Risk Management Approaches |
| WM&R | Policy | Bunker Hill Superfund Site Final Repository Cap Design Standards at East Mission Flats and Big Creek Repositories |
| WM&R | Policy | Bunker Hill Superfund Site Institutional Controls Program, Barrier Design Criteria, and Permitting Requirements |
| WM&R | Policy | Bunker Hill Superfund Site Limited Use Repositories Policy |
| WM&R | Policy | Bunker Hill Superfund Site Residential and Commercial Carpeting Disposal Policy |
| WM&R | Policy | Bunker Hill Superfund Site Responsibilities for Repair of Impacted Barriers from Small Scale and Localized Floods or Natural Disasters |
| WM&R | Policy | Bunker Hill Superfund Site Soil and Dust Sample Sieving Policy |
| WM&R | Policy | Bunker Hill Superfund Site Waste Acceptance, Treatment, and Disposal Requirements for Petroleum Contaminated Soils under the Institutional Controls Program |
| WM&R | Policy | Innocent Landowner Policy |
| WM&R | Agreement | Memorandum of Agreement between EPA and DEQ regarding Resource Conservation and Recovery Act (RCRA) |
| WM&R | Agreement | Memorandum of Agreement between EPA and DEQ regarding Resource Conservation and Recovery Act |
| WM&R | Agreement | Memorandum of Agreement between EPA and DEQ Resource Conservation and Recovery Act |
| WM&R | Policy | Groundwater Monitoring for Small Exempt Municipal Solid Waste Landfills Policy 25-02
|
| WM&R | Policy | Hazardous Waste Management Act Civil Penalties Policy PS25-08 |
| WM&R | Policy | Leaking Underground Storage Tank (LUST) Program Cost Recovery Policy PS23-05 |
| WM&R | Policy | Leaking Underground Storage Tank (LUST) Program Penalty Policy PS23-04 |
| WM&R | Memorandum | Mountain Home Airforce Base and DEQ MOU |
| WM&R | Policy | Owners of Property Containing Contamination from Off-site Sources Policy PS25-07
|
| WM&R | Policy | Bunker Hill Superfund Site, Operable Unit 3 Residential and Community Mean Soil Lead Levels Policy |
| WM&R | Policy | PS20-12 Hazardous Waste Management Act Civil Penalties |
| WM&R | Policy | Supplemental Environmental Projects Policy PS25-03 |
| WM&R | Policy | Underground Storage Tank (UST) Program Penalty PS23-03 |